1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g19429

Ore_g19429 (ATPARP2, PARP2)


Aliases : ATPARP2, PARP2

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0001236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g19429

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00184050 ATPARP2, PARP2,... Protein modification.ADP-ribosylation.poly(ADP-ribose)... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010301 ATPARP2, PARP2 EC_2.4 glycosyltransferase & original description: CDS=1-3096 0.03 OrthoFinder output from all 47 species
Ceric.16G070500.1 ATPARP2, PARP2,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.257 ATPARP2, PARP2 Protein modification.ADP-ribosylation.poly(ADP-ribose)... 0.01 OrthoFinder output from all 47 species
Len_g14278 ATPARP2, PARP2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40516 No alias EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12025 ATPARP2, PARP2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003972 RNA ligase (ATP) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001357 BRCT_dom 416 493
IPR012317 Poly(ADP-ribose)pol_cat_dom 805 1006
IPR012982 PADR1 304 354
IPR001510 Znf_PARP 116 192
IPR001510 Znf_PARP 11 87
IPR004102 Poly(ADP-ribose)pol_reg_dom 659 791
IPR008893 WGR_domain 546 625
No external refs found!