Aliases : mtHsc70-1
Description : not classified & original description: none
Gene families : OG0000341 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000341_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Azfi_s0006.g010329 | cpHsc70-1 | chaperone *(cpHsc70)) & original description: CDS=1-2145 | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g02260.1 | HSC70-5,... | chaperone HSCA of mitochondrial ISC system transfer... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g18686 | cpHsc70-1 | chaperone *(cpHsc70)) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g03097 | HSC70-5, MTHSC70-2 | chaperone component *(mtHSP70) of inner mitochondrion... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g35445 | No alias | chaperone component *(mtHSP70) of inner mitochondrion... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g22473 | HSC70-5, MTHSC70-2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g23984 | HSC70-5, MTHSC70-2 | chaperone component *(mtHSP70) of inner mitochondrion... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0140662 | ATP-dependent protein folding chaperone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
CC | GO:0032040 | small-subunit processome | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013126 | Hsp_70_fam | 1 | 222 |
No external refs found! |