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  5. Ore_g11369

Ore_g11369


Description : not classified & original description: none


Gene families : OG0001414 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001414_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g11369
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Ala_g01775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0144.g051628 No alias not classified & original description: CDS=716-1807 0.01 OrthoFinder output from all 47 species
Dcu_g13427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g008350.3.1 Solyc09g008350 ACT domain-containing protein ACR10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!