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  5. Aev_g15441

Aev_g15441


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g15441
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00185200 ATL6,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00211560 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00223430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00176670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT2G35910 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G42360 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G60966 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G17905 ATL4H RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G33565 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07040 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G10380 ATRING1, RING1 RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G42200 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.02 OrthoFinder output from all 47 species
Aob_g30636 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g26562 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30805.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010071 No alias not classified & original description: CDS=1-183 0.02 OrthoFinder output from all 47 species
Azfi_s0099.g044133 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Azfi_s0229.g059103 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Azfi_s0415.g068611 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g43673 No alias E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G083300.1 Ceric.09G083300 not classified & original description: pacid=50586861... 0.03 OrthoFinder output from all 47 species
Ceric.13G075200.1 Ceric.13G075200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.15G075700.1 Ceric.15G075700 not classified & original description: pacid=50639640... 0.02 OrthoFinder output from all 47 species
Ceric.21G001000.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G061600.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G062000.1 Ceric.22G062000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.35G023500.1 Ceric.35G023500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g01390 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g33448 MEE16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06659 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g06418 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g07562 XERICO not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012018001 XERICO Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01028306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Gb_02533 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_04643 No alias RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_04644 ATL2, TL2 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Gb_04645 No alias RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Gb_05005 BRH1 E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_14312 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_14778 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Gb_20844 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_26582 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_32878 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_33184 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.02 OrthoFinder output from all 47 species
LOC_Os01g64620.1 LOC_Os01g64620 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g45390.1 LOC_Os02g45390 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os04g49000.1 BRH1, LOC_Os04g49000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g49160.1 LOC_Os04g49160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g06560.1 LOC_Os07g06560 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os08g44950.1 LOC_Os08g44950 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g00408 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Len_g12737 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22489 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
MA_101154g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_10434759g0010 BRH1 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_201391g0010 BRH1 Probable E3 ubiquitin-protein ligase RHA1A... 0.03 OrthoFinder output from all 47 species
MA_26001g0020 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_2639751g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_308999g0010 ATL2, TL2 RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_308999g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_41514g0010 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_43543g0010 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_61349g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_77628g0010 ATL2, TL2 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_786911g0010 ATL2, TL2 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
MA_80729g0030 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_8338g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_904294g0010 ATL3 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Ore_g03798 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g11149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26309 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g55439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17683 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000797 ATL8 not classified & original description: CDS=1-573 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013072 ATL8 not classified & original description: CDS=1-573 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017298 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018006 XERICO not classified & original description: CDS=1-537 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0149.g023284 No alias not classified & original description: CDS=1-567 0.02 OrthoFinder output from all 47 species
Smo438800 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc02g083660.1.1 Solyc02g083660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g083460.3.1 Solyc03g083460 RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc04g082690.1.1 Solyc04g082690 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc05g010175.1.1 RHA2A, Solyc05g010175 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g061250.3.1 Solyc06g061250 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc06g064440.3.1 Solyc06g064440 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Solyc06g150136.1.1 Solyc06g150136 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc10g008080.3.1 Solyc10g008080 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc10g011880.1.1 Solyc10g011880 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc11g005290.1.1 Solyc11g005290 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc11g005320.1.1 Solyc11g005320 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc12g094690.1.1 Solyc12g094690 RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g15928 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g17343 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g25396 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g30280 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g55760 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e007956_P001 ATRING1, RING1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e008560_P001 RHA2A, Zm00001e008560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e010029_P001 XERICO, Zm00001e010029 ubiquitin protein ligase (XERICO) 0.02 OrthoFinder output from all 47 species
Zm00001e014286_P001 Zm00001e014286 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e014832_P001 Zm00001e014832 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e015449_P001 Zm00001e015449 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e022175_P001 Zm00001e022175 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e023238_P001 Zm00001e023238 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e023515_P001 Zm00001e023515 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e034421_P001 ATL6, Zm00001e034421 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 93 136
No external refs found!