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  5. Ore_g07169

Ore_g07169 (SECA2)


Aliases : SECA2

Description : component *(SecA2) of inner envelope Sec2 post-import insertion system & original description: none


Gene families : OG0001541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g07169
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AT1G21650 SECA2 Preprotein translocase SecA family protein 0.04 OrthoFinder output from all 47 species
Adi_g021940 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Aev_g15097 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Aop_g13689 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Azfi_s0155.g053632 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ceric.13G044200.1 SECA2, Ceric.13G044200 component *(SecA2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Dcu_g05773 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Dde_g11939 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Gb_25957 SECA2 component SecA2 of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
LOC_Os01g21820.1 SECA1, AtcpSecA,... component SecA2 of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
LOC_Os11g08980.1 SECA2, LOC_Os11g08980 Protein translocase subunit SECA2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Lfl_g02357 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Lfl_g10903 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Nbi_g12724 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Ppi_g53734 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Smo176627 SECA2 Protein translocation.chloroplast.inner envelope Sec2... 0.02 OrthoFinder output from all 47 species
Zm00001e008967_P001 SECA2, Zm00001e008967 component SecA2 of inner envelope Sec2 post-import... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0017038 protein import IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004826 phenylalanine-tRNA ligase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR011130 SecA_preprotein_X-link_dom 327 427
IPR011116 SecA_Wing/Scaffold 790 1064
IPR011115 SecA_DEAD 103 470
No external refs found!