Aliases : RAP2.12
Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none
Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ore_g06505 | |
Cluster | HCCA: Cluster_151 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00099p00122430 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.02 | OrthoFinder output from all 47 species | |
AT1G53910 | RAP2.12 | related to AP2 12 | 0.03 | OrthoFinder output from all 47 species | |
AT5G64750 | ABR1 | Integrase-type DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Aev_g16587 | WIN1, SHN1 | cutin and suberin biosynthesis transcription factor... | 0.02 | OrthoFinder output from all 47 species | |
Als_g11527 | TINY2 | subgroup ERF-III transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Als_g37025 | DEAR3 | subgroup ERF-II transcription factor *(ERF16/17/18) &... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g04116 | RAP2.2 | transcription factor component *(HRE/RAP2.12) of... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene05660.t1 | Aspi01Gene05660 | subgroup ERF-III transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene07603.t1 | DEAR1, CEJ1,... | subgroup ERF-II transcription factor *(ERF19/20) &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene24401.t1 | DEAR2, Aspi01Gene24401 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene70906.t1 | Aspi01Gene70906 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0065.g035884 | No alias | subgroup ERF-V transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0070.g036745 | ATERF-9, ERF9, ATERF9 | not classified & original description: CDS=1-3831 | 0.04 | OrthoFinder output from all 47 species | |
Ceric.10G058000.1 | ORA47, Ceric.10G058000 | not classified & original description: pacid=50613486... | 0.02 | OrthoFinder output from all 47 species | |
Dde_g04281 | ATERF12, ERF12 | subgroup ERF-VIII transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g02414 | ERF72, EBP, ATEBP, RAP2.3 | transcription factor component *(HRE/RAP2.12) of... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g25390 | HRE2 | transcription factor component *(HRE/RAP2.12) of... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01013913001 | ERF104 | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g08460.1 | RAP2.12, LOC_Os03g08460 | Ethylene-responsive transcription factor ERF073... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g32620.1 | Rap2.6L, LOC_Os04g32620 | transcription factor (ERF) | 0.02 | OrthoFinder output from all 47 species | |
Len_g20241 | RAP2.2 | transcription factor component *(HRE/RAP2.12) of... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g03871 | RAP2.2 | transcription factor component *(HRE/RAP2.12) of... | 0.02 | OrthoFinder output from all 47 species | |
MA_10426586g0010 | ERF7, ATERF7, ATERF-7 | transcription factor (ERF) | 0.03 | OrthoFinder output from all 47 species | |
MA_467593g0010 | RAP2.12 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_69434g0020 | ERF-1, ATERF-1 | Ethylene-responsive transcription factor 1 OS=Solanum... | 0.01 | OrthoFinder output from all 47 species | |
Mp2g11080.1 | HRE2 | transcription factor (ERF) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g14031 | ATERF4, RAP2.5,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g10528 | CRF4 | subgroup ERF-VI transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g13205 | No alias | subgroup ERF-VI transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0035.g011388 | ERF7, ATERF7, ATERF-7 | subgroup ERF-VIII transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g15417 | No alias | subgroup ERF-IV/DREB2 transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g52130 | No alias | subgroup ERF-III transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g41807 | RAP2.11 | transcription factor *(ERN1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e000608_P002 | Rap2.6L, Zm00001e000608 | Ethylene-responsive transcription factor ERF073... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e026192_P001 | HRE2, Zm00001e026192 | transcription factor (ERF) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003872 | 6-phosphofructokinase activity | IEP | HCCA |
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006099 | tricarboxylic acid cycle | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006486 | protein glycosylation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008443 | phosphofructokinase activity | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
MF | GO:0019200 | carbohydrate kinase activity | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0070085 | glycosylation | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001471 | AP2/ERF_dom | 109 | 157 |
No external refs found! |