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Aliases : TCP3
Description : TCP-type transcription factor & original description: none
Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00154p00072430 | TCP13, TFPD,... | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G02150 | TCP13, TFPD, PTF1 | plastid transcription factor 1 | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g40074 | TCP10 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07553 | TCP3 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g30172 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene02925.t1 | TCP3, Aspi01Gene02925 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene48962.t1 | TCP13, TFPD,... | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene55176.t1 | TCP5, Aspi01Gene55176 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g22010 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g11506 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g13231 | TCP3 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_17863 | TCP3 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_35810 | TCP2 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_38376 | TCP2 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38377 | TCP2 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g11550.1 | TCP4, MEE35,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_101752g0020 | ATTCP24, TCP24 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_547683g0010 | TCP2 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| MA_75780g0010 | TCP2 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| MA_86651g0020 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g19590.1 | TCP3 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g20245 | TCP3 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g089020.2.1 | TCP13, TFPD,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g006980.1.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g009900.3.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g069460.3.1 | TCP5, Solyc06g069460 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g053410.4.1 | TCP4, MEE35,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g048390.3.1 | TCP2, Solyc08g048390 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g014140.3.1 | TCP4, MEE35,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g03446 | TCP3 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011911_P001 | ATTCP24, TCP24,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019734_P001 | TCP5, Zm00001e019734 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e032821_P001 | TCP2, Zm00001e032821 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 118 | 243 |
| No external refs found! |