1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g04884

Ore_g04884 (HSP21)


Aliases : HSP21

Description : not classified & original description: none


Gene families : OG0000788 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000788_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g04884

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017322001 No alias External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
LOC_Os02g52150.1 LOC_Os02g52150 class-M-I small heat-shock-responsive protein 0.04 OrthoFinder output from all 47 species
Ore_g42087 HSP21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43686 HSP21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005050 ATHSP23.6-MITO,... not classified & original description: CDS=85-771 0.02 OrthoFinder output from all 47 species
Smo405022 HSP21 Small heat shock protein, chloroplastic OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
Solyc03g082420.3.1 HSP21, Solyc03g082420 class-P small heat-shock-responsive protein 0.03 OrthoFinder output from all 47 species
Solyc05g014280.4.1 HSP21, Solyc05g014280 Small heat shock protein, chloroplastic OS=Pisum sativum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 117 213
No external refs found!