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  5. Ore_g04604

Ore_g04604 (ATTIM44-2, TIM44-2)


Aliases : ATTIM44-2, TIM44-2

Description : component *(Tim44) of inner mitochondrion membrane TIM translocation system & original description: none


Gene families : OG0003222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003222_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g04604
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00028100 ATTIM44-2,... Protein translocation.mitochondrion.inner mitochondrion... 0.02 OrthoFinder output from all 47 species
Adi_g056906 ATTIM44-2, TIM44-2 component *(Tim44) of inner mitochondrion membrane TIM... 0.04 OrthoFinder output from all 47 species
Als_g13830 ATTIM44-2, TIM44-2 component *(Tim44) of inner mitochondrion membrane TIM... 0.03 OrthoFinder output from all 47 species
Aop_g05813 ATTIM44-2, TIM44-2 component *(Tim44) of inner mitochondrion membrane TIM... 0.02 OrthoFinder output from all 47 species
Ceric.33G046100.1 ATTIM44-2,... component *(Tim44) of inner mitochondrion membrane TIM... 0.03 OrthoFinder output from all 47 species
Dac_g15940 ATTIM44-2, TIM44-2 component *(Tim44) of inner mitochondrion membrane TIM... 0.03 OrthoFinder output from all 47 species
Dcu_g22113 ATTIM44-2, TIM44-2 component *(Tim44) of inner mitochondrion membrane TIM... 0.02 OrthoFinder output from all 47 species
Mp4g14710.1 ATTIM44-2, TIM44-2 component Tim44 of inner mitochondrion membrane TIM... 0.02 OrthoFinder output from all 47 species
Pir_g15487 ATTIM44-2, TIM44-2 component *(Tim44) of inner mitochondrion membrane TIM... 0.02 OrthoFinder output from all 47 species
Ppi_g11449 ATTIM44-2, TIM44-2 component *(Tim44) of inner mitochondrion membrane TIM... 0.03 OrthoFinder output from all 47 species
Sam_g49799 No alias component *(Tim44) of inner mitochondrion membrane TIM... 0.02 OrthoFinder output from all 47 species
Zm00001e011017_P001 ATTIM44-2,... component Tim44 of inner mitochondrion membrane TIM... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007379 Tim44-like_dom 300 452
No external refs found!