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  5. Ore_g00399

Ore_g00399 (ATPB, PB)


Aliases : ATPB, PB

Description : subunit beta of peripheral CF1 subcomplex of ATP synthase complex & original description: none


Gene families : OG0000973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000973_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g00399

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272630 ATPB, PB,... ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00029530 ATPB, PB,... ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda 0.02 OrthoFinder output from all 47 species
AMTR_s00606p00000120 ATPB, PB,... ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda 0.08 OrthoFinder output from all 47 species
ATCG00480 ATPB, PB ATP synthase subunit beta 0.18 OrthoFinder output from all 47 species
Aev_g10806 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.21 OrthoFinder output from all 47 species
Als_g08694 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Aob_g06682 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
Ceric.02G014100.1 ATPB, PB, Ceric.02G014100 not classified & original description: pacid=50586216... 0.07 OrthoFinder output from all 47 species
Ceric.03G022700.1 ATPB, PB, Ceric.03G022700 subunit beta of peripheral CF1 subcomplex of ATP... 0.11 OrthoFinder output from all 47 species
Ceric.09G048700.1 ATPB, PB, Ceric.09G048700 subunit beta of peripheral CF1 subcomplex of ATP... 0.07 OrthoFinder output from all 47 species
Ceric.1Z141700.1 ATPB, PB, Ceric.1Z141700 subunit beta of peripheral CF1 subcomplex of ATP... 0.12 OrthoFinder output from all 47 species
Ceric.1Z162000.1 ATPB, PB, Ceric.1Z162000 not classified & original description: pacid=50596930... 0.02 OrthoFinder output from all 47 species
Ceric.32G035500.1 ATPB, PB, Ceric.32G035500 not classified & original description: pacid=50597326... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001376.3 No alias ATP synthase subunit beta, mitochondrial... 0.02 OrthoFinder output from all 47 species
Cre17.g698000 No alias Cellular respiration.oxidative phosphorylation.ATP... 0.03 OrthoFinder output from all 47 species
Dcu_g20874 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.11 OrthoFinder output from all 47 species
GSVIVT01006210001 ATPB, PB ATP synthase subunit beta, chloroplastic OS=Vitis vinifera 0.11 OrthoFinder output from all 47 species
Gb_00175 ATPB, PB ATP synthase subunit beta, chloroplastic OS=Picea abies... 0.13 OrthoFinder output from all 47 species
Gb_11358 ATPB, PB subunit epsilon of peripheral CF1 subcomplex of ATP... 0.12 OrthoFinder output from all 47 species
Gb_22349 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.13 OrthoFinder output from all 47 species
LOC_Os01g25065.1 ATPB, PB, LOC_Os01g25065 ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.22 OrthoFinder output from all 47 species
LOC_Os05g35320.1 ATPB, PB, LOC_Os05g35320 ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.12 OrthoFinder output from all 47 species
LOC_Os06g39740.1 ATPB, PB, LOC_Os06g39740 subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.05 OrthoFinder output from all 47 species
LOC_Os10g21266.1 ATPB, PB, LOC_Os10g21266 subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.23 OrthoFinder output from all 47 species
LOC_Os12g10570.1 ATPB, PB, LOC_Os12g10570 ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.24 OrthoFinder output from all 47 species
Lfl_g05507 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.2 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010854 ATPB, PB not classified & original description: CDS=1-264 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0228.g026385 ATPB, PB not classified & original description: CDS=1-342 0.05 OrthoFinder output from all 47 species
Sam_g02504 No alias subunit beta of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Smo236855 ATPB, PB ATP synthase subunit beta, chloroplastic OS=Psilotum nudum 0.07 OrthoFinder output from all 47 species
Solyc07g021180.3.1 ATPB, PB, Solyc07g021180 ATP synthase subunit beta, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Solyc12g062530.3.1 ATPB, PB, Solyc12g062530 ATP synthase subunit beta, chloroplastic OS=Solanum... 0.02 OrthoFinder output from all 47 species
Spa_g51445 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.04 OrthoFinder output from all 47 species
Zm00001e042082_P001 ATPB, PB, Zm00001e042082 ATP synthase subunit beta, chloroplastic OS=Zea mays... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004100 ATPase_F1/V1/A1_a/bsu_N 21 93
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 150 370
No external refs found!