Aliases : PETB
Description : apocytochrome b component *(PetB) of cytochrome b6/f complex & original description: none
Gene families : OG0002807 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002807_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ore_g00397 | |
Cluster | HCCA: Cluster_7 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G07727 | No alias | Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal | 0.05 | OrthoFinder output from all 47 species | |
ATCG00720 | PETB | photosynthetic electron transfer B | 0.22 | OrthoFinder output from all 47 species | |
Aev_g24354 | No alias | apocytochrome b component of cytochrome c reductase... | 0.26 | OrthoFinder output from all 47 species | |
Aev_g27762 | PETB | apocytochrome b component *(PetB) of cytochrome b6/f... | 0.24 | OrthoFinder output from all 47 species | |
Ala_g35856 | No alias | apocytochrome b component of cytochrome c reductase... | 0.09 | OrthoFinder output from all 47 species | |
Als_g39169 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Aob_g16275 | No alias | apocytochrome b component of cytochrome c reductase... | 0.07 | OrthoFinder output from all 47 species | |
Aop_g43076 | No alias | apocytochrome b component of cytochrome c reductase... | 0.12 | OrthoFinder output from all 47 species | |
Azfi_s0264.g060907 | No alias | not classified & original description: CDS=1-306 | 0.04 | OrthoFinder output from all 47 species | |
Cba_g67442 | No alias | apocytochrome b component of cytochrome c reductase... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.05G041700.1 | PETB, Ceric.05G041700 | not classified & original description: pacid=50577646... | 0.17 | OrthoFinder output from all 47 species | |
Ceric.05G044900.1 | PETB, Ceric.05G044900 | not classified & original description: pacid=50577209... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.05G051500.1 | PETB, Ceric.05G051500 | not classified & original description: pacid=50578079... | 0.09 | OrthoFinder output from all 47 species | |
Ceric.17G047400.1 | Ceric.17G047400 | not classified & original description: pacid=50617400... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.1Z019500.1 | PETB, Ceric.1Z019500 | apocytochrome b component *(PetB) of cytochrome b6/f... | 0.1 | OrthoFinder output from all 47 species | |
Ceric.1Z020900.1 | PETB, Ceric.1Z020900 | not classified & original description: pacid=50586386... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.1Z163200.1 | PETB, Ceric.1Z163200 | not classified & original description: pacid=50596955... | 0.14 | OrthoFinder output from all 47 species | |
Ceric.1Z190500.1 | Ceric.1Z190500 | not classified & original description: pacid=50582113... | 0.11 | OrthoFinder output from all 47 species | |
Ceric.1Z200500.1 | Ceric.1Z200500 | not classified & original description: pacid=50618881... | 0.2 | OrthoFinder output from all 47 species | |
Ceric.1Z276900.1 | Ceric.1Z276900 | not classified & original description: pacid=50569323... | 0.2 | OrthoFinder output from all 47 species | |
Ceric.1Z297500.1 | Ceric.1Z297500 | not classified & original description: pacid=50597032... | 0.2 | OrthoFinder output from all 47 species | |
Ceric.1Z311700.1 | Ceric.1Z311700 | not classified & original description: pacid=50567778... | 0.2 | OrthoFinder output from all 47 species | |
Ceric.29G003700.1 | PETB, Ceric.29G003700 | not classified & original description: pacid=50624590... | 0.1 | OrthoFinder output from all 47 species | |
Ceric.36G044700.1 | PETB, Ceric.36G044700 | not classified & original description: pacid=50568540... | 0.12 | OrthoFinder output from all 47 species | |
Ceric.38G008400.1 | PETB, Ceric.38G008400 | not classified & original description: pacid=50579337... | 0.17 | OrthoFinder output from all 47 species | |
Dcu_g39082 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g47960 | No alias | apocytochrome b component of cytochrome c reductase... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01012279001 | No alias | Cytochrome b OS=Zea mays | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01018702001 | No alias | Cytochrome b OS=Zea mays | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01018703001 | No alias | Cytochrome b OS=Zea mays | 0.02 | OrthoFinder output from all 47 species | |
Gb_16762 | No alias | cytochrome b component of cytochrome c reductase complex | 0.15 | OrthoFinder output from all 47 species | |
Gb_17283 | No alias | Cytochrome b6 OS=Welwitschia mirabilis... | 0.14 | OrthoFinder output from all 47 species | |
LOC_Os01g57942.1 | PETB, LOC_Os01g57942 | apocytochrome b component PetB of cytochrome b6/f complex | 0.24 | OrthoFinder output from all 47 species | |
LOC_Os04g16846.1 | PETB, LOC_Os04g16846 | apocytochrome b component PetB of cytochrome b6/f complex | 0.24 | OrthoFinder output from all 47 species | |
LOC_Os10g21324.1 | PETB, LOC_Os10g21324 | apocytochrome b component PetB of cytochrome b6/f complex | 0.24 | OrthoFinder output from all 47 species | |
Len_g40106 | No alias | apocytochrome b component of cytochrome c reductase... | 0.03 | OrthoFinder output from all 47 species | |
MA_10392603g0010 | No alias | Cytochrome b OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Mp1g00740.1 | PETB | Cytochrome b6 OS=Marchantia polymorpha... | 0.11 | OrthoFinder output from all 47 species | |
Nbi_g20498 | No alias | apocytochrome b component of cytochrome c reductase... | 0.09 | OrthoFinder output from all 47 species | |
Pir_g06448 | No alias | apocytochrome b component of cytochrome c reductase... | 0.08 | OrthoFinder output from all 47 species | |
Pp3c21_5670V3.1 | PETD, Pp3c21_5670 | photosynthetic electron transfer D | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g00989 | PETB | apocytochrome b component *(PetB) of cytochrome b6/f... | 0.07 | OrthoFinder output from all 47 species | |
Sam_g02910 | No alias | apocytochrome b component *(PetB) of cytochrome b6/f... | 0.12 | OrthoFinder output from all 47 species | |
Sam_g14362 | No alias | apocytochrome b component of cytochrome c reductase... | 0.07 | OrthoFinder output from all 47 species | |
Smo137714 | PETB | Cytochrome b6 OS=Pinus thunbergii | 0.08 | OrthoFinder output from all 47 species | |
Smo139134 | No alias | Cytochrome b OS=Marchantia polymorpha | 0.08 | OrthoFinder output from all 47 species | |
Solyc00g047200.1.1 | Solyc00g047200 | Cytochrome b OS=Solanum tuberosum (sp|p29757|cyb_soltu : 130.0) | 0.04 | OrthoFinder output from all 47 species | |
Solyc00g500240.1.1 | Solyc00g500240 | cytochrome b component of cytochrome c reductase complex | 0.04 | OrthoFinder output from all 47 species | |
Solyc00g500260.1.1 | Solyc00g500260 | cytochrome b component of cytochrome c reductase... | 0.05 | OrthoFinder output from all 47 species | |
Solyc00g500364.1.1 | Solyc00g500364 | cytochrome b component of cytochrome c reductase complex | 0.04 | OrthoFinder output from all 47 species | |
Solyc09g050020.3.1 | Solyc09g050020 | Cytochrome b OS=Vicia faba (sp|p05718|cyb_vicfa : 382.0) | 0.05 | OrthoFinder output from all 47 species | |
Spa_g23500 | No alias | apocytochrome b component of cytochrome c reductase... | 0.08 | OrthoFinder output from all 47 species | |
Tin_g20386 | No alias | apocytochrome b component of cytochrome c reductase... | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0009055 | electron transfer activity | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003954 | NADH dehydrogenase activity | IEP | HCCA |
MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009579 | thylakoid | IEP | HCCA |
BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016168 | chlorophyll binding | IEP | HCCA |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
MF | GO:0016984 | ribulose-bisphosphate carboxylase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019684 | photosynthesis, light reaction | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
BP | GO:0022900 | electron transport chain | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | HCCA |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
MF | GO:0048038 | quinone binding | IEP | HCCA |
MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005797 | Cyt_b/b6_N | 41 | 229 |
No external refs found! |