Aliases : ESP3, EMB2733
Description : RNA helicase *(Prp2) & original description: none
Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G35340 | MEE29 | helicase domain-containing protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G26560 | No alias | ATP-dependent RNA helicase, putative | 0.03 | OrthoFinder output from all 47 species | |
Adi_g084485 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g02597 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aob_g19131 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g29988 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g13922 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g15706 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0054.g033634 | ESP3, EMB2733 | not classified & original description: CDS=1-2769 | 0.02 | OrthoFinder output from all 47 species | |
Cba_g13014 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.04G078700.1 | Ceric.04G078700 | not classified & original description: pacid=50630845... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.21G075900.1 | EMB3011, Ceric.21G075900 | RNA helicase *(Prp16) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.37G064800.1 | ESP3, EMB2733,... | RNA helicase *(Prp2) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g01933 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g25246 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01007911001 | ESP3, EMB2733 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01029863001 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
Gb_13411 | EMB3011 | RNA helicase (Prp16) | 0.03 | OrthoFinder output from all 47 species | |
Gb_14270 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
Len_g01369 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g08915 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g57131 | EMB3011 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05720 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10217744g0010 | No alias | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.02 | OrthoFinder output from all 47 species | |
Mp4g16380.1 | ESP3, EMB2733 | RNA helicase (Prp2) | 0.01 | OrthoFinder output from all 47 species | |
Msp_g00692 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g10611 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g42980 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g18506 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g66576 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g05341 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g08957 | No alias | RNA helicase *(Prp2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g14599 | No alias | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g48742 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g008120.4.1 | Solyc09g008120 | RNA helicase (Prp22) | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g076910.2.1 | EMB3011, Solyc10g076910 | RNA helicase (Prp16) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g22116 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g31207 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010450_P001 | EMB3011, Zm00001e010450 | RNA helicase (Prp16) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e036358_P005 | Zm00001e036358 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006298 | mismatch repair | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016073 | snRNA metabolic process | IEP | HCCA |
BP | GO:0016180 | snRNA processing | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034472 | snRNA 3'-end processing | IEP | HCCA |
BP | GO:0034477 | U6 snRNA 3'-end processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
No external refs found! |