LOC_Os12g35400.1


Description : no hits & (original description: none)


Gene families : OG_01_0000538 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000538_tree ,
OG_02_0000814 (LandPlants) Phylogenetic Tree(s): OG_02_0000814_tree ,
OG_03_0000441 (SeedPlants) Phylogenetic Tree(s): OG_03_0000441_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g35400.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g14200.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g37580.1 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.05 Archaeplastida
LOC_Os01g43980.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g16300.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g24090.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g47340.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g28260.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g02230.1 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.04 Archaeplastida
LOC_Os10g22130.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g12580.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g44830.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g06230.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g26850.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g32690.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os01g14200.1 No alias no hits & (original description: none) 0.05 LandPlants
LOC_Os01g37580.1 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.05 LandPlants
LOC_Os01g43980.1 No alias no hits & (original description: none) 0.04 LandPlants
LOC_Os05g28260.1 No alias no hits & (original description: none) 0.04 LandPlants
LOC_Os07g02230.1 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.04 LandPlants
LOC_Os07g45750.1 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.03 LandPlants
LOC_Os11g44830.1 No alias no hits & (original description: none) 0.05 LandPlants
LOC_Os12g06230.1 No alias no hits & (original description: none) 0.05 LandPlants
LOC_Os12g26850.1 No alias no hits & (original description: none) 0.04 LandPlants
LOC_Os12g32690.1 No alias no hits & (original description: none) 0.07 LandPlants
LOC_Os01g14200.1 No alias no hits & (original description: none) 0.05 SeedPlants
LOC_Os01g37580.1 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.05 SeedPlants
LOC_Os01g43980.1 No alias no hits & (original description: none) 0.04 SeedPlants
LOC_Os05g28260.1 No alias no hits & (original description: none) 0.04 SeedPlants
LOC_Os07g02230.1 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.04 SeedPlants
LOC_Os07g45750.1 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.03 SeedPlants
LOC_Os11g44830.1 No alias no hits & (original description: none) 0.05 SeedPlants
LOC_Os11g47410.1 No alias no hits & (original description: none) 0.03 SeedPlants
LOC_Os12g06230.1 No alias no hits & (original description: none) 0.05 SeedPlants
LOC_Os12g26850.1 No alias no hits & (original description: none) 0.04 SeedPlants
LOC_Os12g32690.1 No alias no hits & (original description: none) 0.07 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA Interproscan
MF GO:0003678 DNA helicase activity IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010285 DNA_helicase_pif1-like 1 106
IPR010285 DNA_helicase_pif1-like 107 207
No external refs found!