Ppi_g60559

Description : riboflavin synthase *(RibC) & original description: none

Gene families : OG0004364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004364_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g60559
Cluster	HCCA: Cluster_222

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00095p00131150	evm_27.TU.AmTr_v1...	Coenzyme metabolism.FMN/FAD biosynthesis.riboflavin...	0.02	OrthoFinder output from all 47 species
Dac_g15151	No alias	riboflavin synthase *(RibC) & original description: none	0.02	OrthoFinder output from all 47 species
Mp2g12570.1	No alias	riboflavin synthase (RibC)	0.02	OrthoFinder output from all 47 species
Pnu_g05256	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007176	No alias	riboflavin synthase *(RibC) & original description: CDS=1-780	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR026017	Lumazine-bd_dom	172	258
IPR026017	Lumazine-bd_dom	75	158

External Links

No external refs found!