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  5. Ppi_g57439

Ppi_g57439 (bZIP16, AtbZIP16)


Aliases : bZIP16, AtbZIP16

Description : bZIP class-G transcription factor & original description: none


Gene families : OG0000424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g57439

Target Alias Description ECC score Gene Family Method Actions
Aop_g20927 GBF3 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31985.t2 bZIP16,... bZIP class-G transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009734 bZIP16, AtbZIP16 not classified & original description: CDS=205-1353 0.04 OrthoFinder output from all 47 species
Cba_g20426 bZIP68, AtbZIP68 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29987 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38432 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g46563 ATBZIP54, GBF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78269 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cre16.g692250 GBF3 RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
Dde_g38984 GBF3 bZIP class-G transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22121 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_35962 GBF3 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Nbi_g12749 bZIP68, AtbZIP68 bZIP class-G transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34017 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g050220.3.1 GBF3, Solyc05g050220 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e017863_P001 bZIP68,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004827 bZIP 247 308
IPR012900 MFMR 3 89
No external refs found!