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Aliases : LHCA5
Description : linker protein *(LHCa5) between PS-I complex and NDH complex & original description: none
Gene families : OG0000742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000742_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00264770 | CAB4, LHCA4,... | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00013p00180670 | LHCA2,... | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00131p00114510 | evm_27.TU.AmTr_v1... | Photosystem I chlorophyll a/b-binding protein 6,... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G61470 | LHCA2 | photosystem I light harvesting complex gene 2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g001938 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g13249 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g00950 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g00983 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g21633 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05433 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07082 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g08832 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g10644 | LHCA2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g11303 | LHCA2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g13294 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g17482 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12147 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13138 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G037200.1 | CAB4, LHCA4,... | component *(LHCa4) of LHC-I complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g272650 | LHCA5 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.04 | OrthoFinder output from all 47 species | |
| Cre06.g278213 | CAB4, LHCA4 | Chlorophyll a-b binding protein P4, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Cre10.g425900 | CAB4, LHCA4 | Chlorophyll a-b binding protein 4, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Cre10.g452050 | CAB4, LHCA4 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder output from all 47 species | |
| Cre16.g687900 | LHCA5 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g04068 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g29671 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g34548 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45197 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g02029 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_08408 | CAB4, LHCA4 | component LHCa4 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species | |
| Gb_32082 | LHCA2 | component LHCa2 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g38960.1 | LHCA2, LOC_Os07g38960 | component LHCa2 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g33820.1 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g26810.1 | LOC_Os09g26810 | component LHCa6 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species | |
| Len_g09864 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g17260 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_65346g0010 | CAB4, LHCA4 | Chlorophyll a-b binding protein P4, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g07840.1 | CAB4, LHCA4 | component LHCa4 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g13180.1 | LHCA2 | component LHCa2 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g04666 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g07782 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07783 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g40409 | No alias | component *(LHCa2) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g009200.2.1 | LHCA2*1, LHCA6,... | component LHCa6 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0030145 | manganese ion binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 68 | 236 |
| No external refs found! |