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  5. Ppi_g41596

Ppi_g41596


Description : not classified & original description: none


Gene families : OG0000738 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000738_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g41596
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AT5G22310 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
AT5G41620 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
Adi_g116338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20197 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g21327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10833.t1 Aspi01Gene10833 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G022900.1 Ceric.28G022900 not classified & original description: pacid=50569894... 0.03 OrthoFinder output from all 47 species
GSVIVT01027031001 No alias Uncharacterized protein At5g41620 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os06g31190.1 LOC_Os06g31190 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g08580.1 No alias Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g12075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g00182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g095390.3.1 Solyc01g095390 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Spa_g37485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e030712_P001 Zm00001e030712 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!