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  5. Ppi_g31063

Ppi_g31063


Description : regulatory GTPase (NOG1) of LSU processome & original description: none


Gene families : OG0004754 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004754_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g31063
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00241220 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021432.35 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Gb_00431 No alias NOG1 LSU processome regulatory GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os07g01920.1 LOC_Os07g01920 NOG1 LSU processome regulatory GTPase 0.03 OrthoFinder output from all 47 species
Lfl_g02079 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.02 OrthoFinder output from all 47 species
Mp6g16060.1 No alias NOG1 LSU processome regulatory GTPase 0.03 OrthoFinder output from all 47 species
Nbi_g11011 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.02 OrthoFinder output from all 47 species
Pir_g05601 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002936 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.02 OrthoFinder output from all 47 species
Sam_g12622 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.02 OrthoFinder output from all 47 species
Smo231970 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Spa_g09142 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004484 mRNA guanylyltransferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041623 NOG1_N 6 165
IPR012973 NOG_C 410 463
IPR010674 NOG1_Rossman_fold_dom 235 292
No external refs found!