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  5. Ppi_g22075

Ppi_g22075 (ALS3)


Aliases : ALS3

Description : not classified & original description: none


Gene families : OG0001009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g22075
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Als_g11722 ALS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G042600.1 ALS3, Ceric.34G042600 not classified & original description: pacid=50622744... 0.03 OrthoFinder output from all 47 species
Dac_g08227 ALS3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06131 ALS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21650 ALS3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09643 ALS3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017676 No alias not classified & original description: CDS=250-1122 0.05 OrthoFinder output from all 47 species
Sam_g18106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005226 UPF0014_fam 73 305
No external refs found!