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  5. Ppi_g17464

Ppi_g17464


Description : not classified & original description: none


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g17464

Target Alias Description ECC score Gene Family Method Actions
Ceric.09G060200.1 Ceric.09G060200 not classified & original description: pacid=50588484... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020801.34 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01003713001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g14357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50317 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015127_P001 Zm00001e015127 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002035 VWF_A 310 499
IPR032838 Vwaint_dom 671 741
IPR001841 Znf_RING 99 128
No external refs found!