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Aliases : PHR2
Description : not classified & original description: none
Gene families : OG0002446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002446_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g16597 | |
| Cluster | HCCA: Cluster_213 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions | |
|---|---|---|---|---|---|---|
| AT2G47590 | PHR2 | photolyase/blue-light receptor 2 | 0.07 | OrthoFinder output from all 47 species | ||
| Adi_g009893 | PHR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | ||
| Ala_g06176 | PHR2 | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | ||
| Aob_g13086 | PHR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | ||
| Aspi01Gene52251.t1 | PHR2, Aspi01Gene52251 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | ||
| Azfi_s0008.g011414 | PHR2 | not classified & original description: CDS=126-1718 | 0.02 | OrthoFinder output from all 47 species | ||
| Cba_g01961 | PHR2 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | ||
| Ceric.17G008500.1 | PHR2, Ceric.17G008500 | not classified & original description: pacid=50618046... | 0.07 | OrthoFinder output from all 47 species | ||
| Cpa|evm.model.tig00020927.32 | PHR2 | Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | ||
| Cpa|evm.model.tig00020965.69 | PHR2 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.02 | OrthoFinder output from all 47 species | ||
| Dac_g07106 | PHR2 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | ||
| Dcu_g14608 | PHR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | ||
| Dde_g16959 | PHR2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | ||
| Ehy_g12595 | PHR2 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | ||
| Len_g22295 | PHR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | ||
| Lfl_g01575 | PHR2 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | ||
| Lfl_g13197 | PHR2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | ||
| Mp1g05530.1 | PHR2 | Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | ||
| Nbi_g11246 | PHR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | ||
| Ore_g09984 | PHR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | ||
| Ore_g31228 | PHR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | ||
| Pnu_g20563 | PHR2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | ||
| Pp3c1_18130V3.1 | PHR2, Pp3c1_18130 | photolyase/blue-light receptor 2 | 0.01 | OrthoFinder output from all 47 species | ||
| Sacu_v1.1_s0093.g019065 | PHR2 | not classified & original description: CDS=259-1776 | 0.09 | OrthoFinder output from all 47 species | ||
| Smo85247 | PHR2 | Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | ||
| Solyc09g075180.3.1 | PHR2, Solyc09g075180 | Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | ||
| Spa_g29926 | PHR2 | not classified & original description: none | 0.04 | Extended | OrthoFinder output from all 47 species | |
| Tin_g29221 | PHR2 | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006050 | DNA_photolyase_N | 170 | 329 |
| No external refs found! |