Description : not classified & original description: none
Gene families : OG0000629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000629_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00004p00115360 | evm_27.TU.AmTr_v1... | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00025p00230510 | evm_27.TU.AmTr_v1... | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00028p00237040 | evm_27.TU.AmTr_v1... | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AT1G58060 | No alias | RNA helicase family protein | 0.04 | OrthoFinder output from all 47 species | |
AT2G01130 | No alias | DEA(D/H)-box RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G04895 | No alias | DEA(D/H)-box RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g057149 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g12900 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g04475 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g10895 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g14017 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0022.g015912 | No alias | not classified & original description: CDS=1-2058 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0449.g070725 | No alias | not classified & original description: CDS=208-3285 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.06G015600.1 | Ceric.06G015600 | not classified & original description: pacid=50620151... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.20G077000.1 | Ceric.20G077000 | not classified & original description: pacid=50565979... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.23G070100.1 | Ceric.23G070100 | not classified & original description: pacid=50609964... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000786.1 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cre06.g266416 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
Gb_33245 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g53760.1 | LOC_Os03g53760 | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Len_g47532 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g03480 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g04976 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g18805 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10425930g0020 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
MA_10429367g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
MA_177779g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
MA_291146g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
Mp5g09990.1 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g20169 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pp3c17_19726V3.1 | Pp3c17_19726 | RNA helicase family protein | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0070.g016669 | No alias | not classified & original description: CDS=25-1776 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g14582 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo173775 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Smo437743 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g006970.4.1 | Solyc01g006970 | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g007510.4.1 | Solyc04g007510 | DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g47720 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g02164 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e004608_P001 | Zm00001e004608 | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | HCCA |
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | HCCA |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0000966 | RNA 5'-end processing | IEP | HCCA |
BP | GO:0001682 | tRNA 5'-leader removal | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | HCCA |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006887 | exocytosis | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
CC | GO:0030677 | ribonuclease P complex | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
BP | GO:0099116 | tRNA 5'-end processing | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1902555 | endoribonuclease complex | IEP | HCCA |
CC | GO:1905348 | endonuclease complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |