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  5. Ppi_g11260

Ppi_g11260


Description : not classified & original description: none


Gene families : OG0007552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007552_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g11260
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AT5G57345 No alias unknown protein; Has 30201 Blast hits to 17322 proteins... 0.03 OrthoFinder output from all 47 species
Adi_g001525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48176 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g10793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26113 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g01070 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g25678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04917 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g00339 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01029235001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_04701 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g47970.1 LOC_Os06g47970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9214342g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g09488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25477 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017898 No alias not classified & original description: CDS=1-576 0.07 OrthoFinder output from all 47 species
Sam_g09662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g00598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29938 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e013119_P001 Zm00001e013119 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!