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  5. Ppi_g07478

Ppi_g07478


Description : not classified & original description: none


Gene families : OG0001514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g07478

Target Alias Description ECC score Gene Family Method Actions
Adi_g088467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08851 RPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G075200.1 RPD1, Ceric.16G075200 not classified & original description: pacid=50589258... 0.07 OrthoFinder output from all 47 species
Ceric.24G018700.1 Ceric.24G018700 not classified & original description: pacid=50629155... 0.02 OrthoFinder output from all 47 species
Ceric.39G028700.1 Ceric.39G028700 not classified & original description: pacid=50582453... 0.02 OrthoFinder output from all 47 species
Dac_g00875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12385 RPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g32540.1 LOC_Os02g32540 no description available(sp|q9zuz6|wtf9_arath : 134.0) 0.02 OrthoFinder output from all 47 species
LOC_Os06g15550.1 LOC_Os06g15550 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Lfl_g05427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06839 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08348 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31693 RPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e041366_P001 Zm00001e041366 no description available(sp|q9zuz6|wtf9_arath : 124.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 59 394
No external refs found!