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  5. Ppi_g06908

Ppi_g06908 (DEGP2)


Aliases : DEGP2

Description : protease *(Deg) & original description: none


Gene families : OG0000580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g06908

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00143260 DEGP2,... Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Aev_g01298 DEGP2 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07091 DEGP2 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.06G009600.1 DEGP2, Ceric.06G009600 protease *(Deg) & original description: pacid=50619443... 0.03 OrthoFinder output from all 47 species
Dde_g17085 DegP9 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04889 DEGP2 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_10855 DEGP2 protease (Deg) 0.02 OrthoFinder output from all 47 species
LOC_Os05g05480.1 DEGP2, LOC_Os05g05480 protease (Deg) 0.03 OrthoFinder output from all 47 species
Lfl_g34778 DEGP2 protease *(Deg) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g11733 DEGP2 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13145 DEGP2 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g47543 DegP10 protease *(Deg) & original description: none 0.01 OrthoFinder output from all 47 species
Smo100929 DEGP2 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Solyc06g084480.3.1 DEGP2, Solyc06g084480 protease (Deg) 0.04 OrthoFinder output from all 47 species
Solyc09g074420.4.1 DEGP2, Solyc09g074420 protease (Deg) 0.04 OrthoFinder output from all 47 species
Zm00001e040416_P002 DEGP2, Zm00001e040416 protease (Deg) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR041517 DEGP_PDZ 422 566
IPR001478 PDZ 314 413
No external refs found!