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  5. Ppi_g06343

Ppi_g06343 (ATCSN2, CSN2, FUS12, COP12)


Aliases : ATCSN2, CSN2, FUS12, COP12

Description : component *(CSN2) of COP9 signalosome complex & original description: none


Gene families : OG0004084 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004084_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g06343

Target Alias Description ECC score Gene Family Method Actions
Aev_g01111 ATCSN2, CSN2,... component *(CSN2) of COP9 signalosome complex & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021435.13 ATCSN2, CSN2,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.04 OrthoFinder output from all 47 species
Cre01.g030800 ATCSN2, CSN2,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os01g17180.1 ATCSN2, CSN2,... component CSN2 of COP9 signalosome complex 0.02 OrthoFinder output from all 47 species
Mp8g08470.1 ATCSN2, CSN2,... component CSN2 of COP9 signalosome complex 0.02 OrthoFinder output from all 47 species
Spa_g08823 ATCSN2, CSN2,... component *(CSN2) of COP9 signalosome complex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e025479_P001 ATCSN2, CSN2,... component CSN2 of COP9 signalosome complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 306 408
No external refs found!