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  5. Ppi_g00989

Ppi_g00989 (PETB)


Aliases : PETB

Description : apocytochrome b component *(PetB) of cytochrome b6/f complex & original description: none


Gene families : OG0002807 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002807_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g00989
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
ATCG00720 PETB photosynthetic electron transfer B 0.07 OrthoFinder output from all 47 species
Aev_g24354 No alias apocytochrome b component of cytochrome c reductase... 0.06 OrthoFinder output from all 47 species
Aev_g27762 PETB apocytochrome b component *(PetB) of cytochrome b6/f... 0.06 OrthoFinder output from all 47 species
Ceric.05G041700.1 PETB, Ceric.05G041700 not classified & original description: pacid=50577646... 0.1 OrthoFinder output from all 47 species
Ceric.05G044900.1 PETB, Ceric.05G044900 not classified & original description: pacid=50577209... 0.05 OrthoFinder output from all 47 species
Ceric.05G051500.1 PETB, Ceric.05G051500 not classified & original description: pacid=50578079... 0.05 OrthoFinder output from all 47 species
Ceric.1Z019500.1 PETB, Ceric.1Z019500 apocytochrome b component *(PetB) of cytochrome b6/f... 0.08 OrthoFinder output from all 47 species
Ceric.1Z163200.1 PETB, Ceric.1Z163200 not classified & original description: pacid=50596955... 0.06 OrthoFinder output from all 47 species
Ceric.1Z190500.1 Ceric.1Z190500 not classified & original description: pacid=50582113... 0.06 OrthoFinder output from all 47 species
Ceric.1Z200500.1 Ceric.1Z200500 not classified & original description: pacid=50618881... 0.08 OrthoFinder output from all 47 species
Ceric.1Z276900.1 Ceric.1Z276900 not classified & original description: pacid=50569323... 0.08 OrthoFinder output from all 47 species
Ceric.1Z297500.1 Ceric.1Z297500 not classified & original description: pacid=50597032... 0.08 OrthoFinder output from all 47 species
Ceric.1Z311700.1 Ceric.1Z311700 not classified & original description: pacid=50567778... 0.08 OrthoFinder output from all 47 species
Ceric.29G003700.1 PETB, Ceric.29G003700 not classified & original description: pacid=50624590... 0.05 OrthoFinder output from all 47 species
Ceric.36G044700.1 PETB, Ceric.36G044700 not classified & original description: pacid=50568540... 0.09 OrthoFinder output from all 47 species
Ceric.38G008400.1 PETB, Ceric.38G008400 not classified & original description: pacid=50579337... 0.1 OrthoFinder output from all 47 species
Gb_17283 No alias Cytochrome b6 OS=Welwitschia mirabilis... 0.04 OrthoFinder output from all 47 species
LOC_Os01g57942.1 PETB, LOC_Os01g57942 apocytochrome b component PetB of cytochrome b6/f complex 0.1 OrthoFinder output from all 47 species
LOC_Os04g16846.1 PETB, LOC_Os04g16846 apocytochrome b component PetB of cytochrome b6/f complex 0.1 OrthoFinder output from all 47 species
LOC_Os10g21324.1 PETB, LOC_Os10g21324 apocytochrome b component PetB of cytochrome b6/f complex 0.1 OrthoFinder output from all 47 species
MA_10392603g0010 No alias Cytochrome b OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g00740.1 PETB Cytochrome b6 OS=Marchantia polymorpha... 0.04 OrthoFinder output from all 47 species
Ore_g00397 PETB apocytochrome b component *(PetB) of cytochrome b6/f... 0.07 OrthoFinder output from all 47 species
Sam_g02910 No alias apocytochrome b component *(PetB) of cytochrome b6/f... 0.1 OrthoFinder output from all 47 species
Smo137714 PETB Cytochrome b6 OS=Pinus thunbergii 0.07 OrthoFinder output from all 47 species
Smo139134 No alias Cytochrome b OS=Marchantia polymorpha 0.05 OrthoFinder output from all 47 species
Solyc07g032450.1.1 PETB, Solyc07g032450 Cytochrome b6 OS=Panax ginseng (sp|q68rx7|cyb6_pangi : 96.7) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005797 Cyt_b/b6_N 50 238
No external refs found!