Heatmap: Cluster_17 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Sterile Frond
Fertile Frond
Young Stem with Root
Mature Stem with Root
Root
0.64 0.66 -0.47 -0.78 -0.83
Ppi_g00989 (PETB)
1.19 1.07 -2.51 -2.08 -2.32
Ppi_g01211 (PSBD)
1.11 1.42 -3.76 -4.19 -4.36
Ppi_g01384 (PSAB)
1.19 1.32 -3.67 -3.56 -4.34
Ppi_g02251 (PSBB)
1.29 1.24 -3.25 -4.5 -4.28
Ppi_g02376 (PSBC)
1.12 1.33 -2.96 -3.38 -3.51
0.93 1.23 -2.63 -1.7 -1.86
1.11 1.27 -2.36 -3.09 -3.05
1.18 0.72 -1.79 -1.43 -1.22
1.16 1.11 -2.01 -3.21 -2.02
Ppi_g04678 (ATPI)
0.98 1.14 -2.07 -2.13 -1.52
1.45 1.16 -7.34 -6.09 -8.37
1.02 0.77 -2.38 -0.8 -1.0
Ppi_g05924 (ATPA)
0.93 1.21 -1.84 -1.59 -2.58
Ppi_g05948 (PSBG)
1.0 1.4 -2.57 -2.99 -3.96
Ppi_g06497 (PSBA)
1.37 1.23 -4.8 -5.48 -6.19
1.46 0.73 -3.55 -1.28 -3.27
1.31 1.08 -2.17 -3.08 -3.98
Ppi_g08990 (RBCL)
1.3 1.28 -4.5 -5.32 -5.13
Ppi_g09300 (ADS3)
1.3 0.7 -1.61 -0.83 -5.23
1.49 0.88 -3.21 -2.56 -3.63
1.37 0.35 -1.72 -1.69 -0.94
1.18 1.31 -2.0 - -
1.47 0.07 -1.16 -0.44 -
Ppi_g20789 (HOT1)
1.77 0.66 - - -
1.09 0.12 -0.75 -0.43 -1.14
0.96 1.01 -2.01 -2.1 -0.85
Ppi_g30882 (LOX1)
1.19 1.11 -1.06 -3.42 -
Ppi_g33052 (PETD)
1.28 0.86 -1.79 -1.67 -2.64
1.03 1.44 -3.01 -3.78 -4.64
1.25 1.12 -2.41 -3.11 -2.82
1.0 0.96 -2.33 -1.37 -1.06
1.37 0.96 -2.86 - -1.54
1.09 1.16 -1.83 -2.28 -2.72
1.29 1.12 -2.35 -2.95 -4.32
1.1 1.25 -2.23 -2.79 -3.08
1.1 1.04 -1.66 -2.23 -1.83
1.3 1.21 -4.21 -4.06 -3.33
Ppi_g47609 (RPS15)
1.08 1.24 -2.73 -1.93 -3.37
0.98 1.31 -2.88 -2.02 -2.5
1.0 1.34 -5.89 -1.81 -2.54
1.24 0.83 -1.51 -1.21 -3.55
1.03 0.74 -0.45 -0.86 -
Ppi_g52856 (NDHJ)
0.71 1.51 -2.95 -1.76 -3.67
Ppi_g53005 (RPS2)
1.11 1.15 -2.56 -2.02 -2.35
Ppi_g53947 (LHT2)
1.39 1.12 -2.8 -3.98 -
2.2 -1.27 - - -
2.32 - - - -
1.27 1.19 -4.76 -2.87 -2.92
1.24 1.15 -2.23 -3.17 -3.4
1.29 1.04 -3.57 -1.24 -
1.39 0.92 -2.0 -2.78 -3.61
2.32 - - - -
1.57 0.52 -2.99 -2.66 -1.68
0.79 1.35 -2.26 - -0.94
1.27 1.08 -2.46 -2.69 -2.81
Ppi_g59861 (ACCD)
1.07 0.8 -0.96 -1.6 -1.67
Ppi_g59862 (PETA)
0.79 0.7 -0.58 -1.04 -1.02
0.66 1.22 -0.85 -1.36 -2.69
1.47 0.57 -2.8 -0.73 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.