AMTR_s00185p00050380 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00185.20

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor

Gene families : OG0000155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00185p00050380

Target	Alias	Description	ECC score	Gene Family Method
Adi_g008976	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32642.t1	Aspi01Gene32642	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g16308	ATBZIP61, BZIP61	bZIP class-L transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01010836001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.03	OrthoFinder output from all 47 species
GSVIVT01034617001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.03	OrthoFinder output from all 47 species
LOC_Os04g41820.1	LOC_Os04g41820	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Pir_g09495	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g34707	No alias	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g45929	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	HCCA
MF	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	IEP	HCCA
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
BP	GO:0006289	nucleotide-excision repair	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0070001	aspartic-type peptidase activity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	427	485

External Links

No external refs found!

AMTR_s00185p00050380 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation