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Aliases : evm_27.TU.AmTr_v1.0_scaffold00142.68
No description available
Gene families : OG0002847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002847_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00142p00104490 | |
| Cluster | HCCA: Cluster_109 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g29206 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g20897 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G056700.1 | Ceric.07G056700 | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g50904 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035723001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g11780.1 | LOC_Os02g11780 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g09763 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g15816 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g01870.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17449 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g03910 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0159.g023849 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g16219 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36170 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e024973_P001 | Zm00001e024973 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012921 | SPOC_C | 47 | 126 |
| No external refs found! |