Sequence Description Alias PCC hrr AMTR_s00002p00269760 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00002.558 0.9177515812594185 2 AMTR_s00062p00161920 Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana ATRBP45A, RBP45A, evm_27.TU.AmTr_v1.0_scaffold00062.151 0.8938695385602724 3 AMTR_s00084p00172980 Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.FREE1 associated protein evm_27.TU.AmTr_v1.0_scaffold00084.46 0.8825165579027578 3 AMTR_s00049p00198350 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VIII kinase D6PKL2, PK5, evm_27.TU.AmTr_v1.0_scaffold00049.210 0.8758750512244932 10 AMTR_s00010p00265700 RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.513 0.8742189483434629 28 AMTR_s00011p00262800 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.SAWADEE transcription factor evm_27.TU.AmTr_v1.0_scaffold00011.199 0.8741733083241158 6 AMTR_s00019p00206980 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.246 0.8732769009353679 9 AMTR_s00002p00195630 RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana PEP, evm_27.TU.AmTr_v1.0_scaffold00002.178 0.8709871929338407 8 AMTR_s00155p00028780 Protein PAT1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.12 0.868168250053156 12 AMTR_s00095p00059370 RNA biosynthesis.transcriptional activation.bZIP superfamily.TGA transcription factor activity.TGA transcription factor TGA2, AHBP-1B, evm_27.TU.AmTr_v1.0_scaffold00095.34 0.866561582336358 10 AMTR_s00078p00155240 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor evm_27.TU.AmTr_v1.0_scaffold00078.136 0.8653509391481458 19 AMTR_s00066p00134410 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.129 0.8650646281073338 31 AMTR_s00025p00131080 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component ATEIF3G1, EIF3G1, evm_27.TU.AmTr_v1.0_scaffold00025.129 0.8641955374594881 24 AMTR_s00004p00164270 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUP1/NUP136 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00004.181 0.8635752561947004 14 AMTR_s00001p00026840 Ubiquitin domain-containing protein DSK2a OS=Arabidopsis thaliana DSK2, evm_27.TU.AmTr_v1.0_scaffold00001.11 0.8620752602433479 15 AMTR_s00085p00052820 Cell division cycle protein 48 homolog OS=Glycine max CDC48A, CDC48, ATCDC48, evm_27.TU.AmTr_v1.0_scaffold00085.22 0.8597730332385448 55 AMTR_s00010p00218150 evm_27.TU.AmTr_v1.0_scaffold00010.227 0.8550726318449361 49 AMTR_s00025p00215680 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00025.292 0.8537333198279016 26 AMTR_s00080p00104750 evm_27.TU.AmTr_v1.0_scaffold00080.39 0.8529922215768256 19 AMTR_s00024p00176520 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase evm_27.TU.AmTr_v1.0_scaffold00024.135 0.8519452500864445 38 AMTR_s00032p00133570 Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor LOS1, evm_27.TU.AmTr_v1.0_scaffold00032.93 0.8518115819704553 21 AMTR_s00146p00095280 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade A phosphatase HAB1, evm_27.TU.AmTr_v1.0_scaffold00146.58 0.8506728963158263 22 AMTR_s00002p00262570 evm_27.TU.AmTr_v1.0_scaffold00002.462 0.850581160297308 23 AMTR_s00024p00250640 Putative AC transposase OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00024.334 0.8504901177758497 41 AMTR_s00032p00053220 Phytohormones.ethylene.perception and signal transduction.ETR/ERS-type receptor protein ETR, ETR1, EIN1, AtETR1, evm_27.TU.AmTr_v1.0_scaffold00032.33 0.8493550549935842 58 AMTR_s00001p00271430 Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana PFU2, UBC23, evm_27.TU.AmTr_v1.0_scaffold00001.488 0.8449676483654096 33 AMTR_s00061p00057890 HAP8, evm_27.TU.AmTr_v1.0_scaffold00061.33 0.8430945636941765 29 AMTR_s00081p00156000 F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00081.66 0.8430727858220967 29 AMTR_s00002p00253550 Protein modification.phosphorylation.CMGC kinase superfamily.SRPK kinase evm_27.TU.AmTr_v1.0_scaffold00002.376 0.8427568924324345 70 AMTR_s00036p00181640 Protein biosynthesis.translation initiation.mRNA loading.eIF4A mRNA unwinding factor EIF4A-2, evm_27.TU.AmTr_v1.0_scaffold00036.91 0.8395005483815816 31 AMTR_s00021p00110500 UBP1-associated protein 2C OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.59 0.8382378187689558 32 AMTR_s00030p00184390 Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.117 0.8378637855820293 33 AMTR_s00107p00143110 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.PTB-type splicing factor PTB2, ATPTB2, evm_27.TU.AmTr_v1.0_scaffold00107.42 0.8378404594549841 34 AMTR_s00002p00223990 evm_27.TU.AmTr_v1.0_scaffold00002.244 0.8354827922530929 35 AMTR_s00025p00114450 BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana ATBPM2, BPM2, evm_27.TU.AmTr_v1.0_scaffold00025.103 0.8342629437486143 36 AMTR_s00156p00043680 evm_27.TU.AmTr_v1.0_scaffold00156.20 0.8340013669446863 37 AMTR_s00090p00122120 Amino acid metabolism.degradation.aromatic amino acid.tyrosine.fumarylacetoacetate hydrolase evm_27.TU.AmTr_v1.0_scaffold00090.61 0.833782328264734 39 AMTR_s00010p00265290 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.PTB-type splicing factor PTB1, PTB, ATPTB1, evm_27.TU.AmTr_v1.0_scaffold00010.510 0.8317188143244769 40 AMTR_s00010p00268040 Protein NEN1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.547 0.8283053705395034 41 AMTR_s00029p00143630 Protein modification.protein folding and quality control.NAC ribosome-associated chaperone complex.beta subunit evm_27.TU.AmTr_v1.0_scaffold00029.167 0.827211622870549 44 AMTR_s00119p00117410 RNA biosynthesis.transcriptional activation.EIL (EIN3-like) transcription factor EIL1, AtEIL1, evm_27.TU.AmTr_v1.0_scaffold00119.91 0.8264761199784589 44 AMTR_s00147p00043750 Protein translocation.nucleus.nucleocytoplasmic transport.importin alpha adaptor proteins IMPA-1, IMPA1, AT-IMP, ATKAP ALPHA, AIMP ALPHA, evm_27.TU.AmTr_v1.0_scaffold00147.17 0.8263058002210029 89 AMTR_s00046p00133890 evm_27.TU.AmTr_v1.0_scaffold00046.67 0.8258220318037897 96 AMTR_s00041p00174550 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component ATTOC132, TOC132, evm_27.TU.AmTr_v1.0_scaffold00041.131 0.8255290846800165 48 AMTR_s00056p00036030 RNA biosynthesis.transcriptional repression.AFP/NINJA transcriptional co-repressor NINJA, evm_27.TU.AmTr_v1.0_scaffold00056.20 0.8244331990118928 53 AMTR_s00009p00252980 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-XII kinase evm_27.TU.AmTr_v1.0_scaffold00009.265 0.8237565084499846 95 AMTR_s00145p00075460 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter PGP20, evm_27.TU.AmTr_v1.0_scaffold00145.27 0.8210867784859162 64 AMTR_s00069p00158470 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component evm_27.TU.AmTr_v1.0_scaffold00069.131 0.8208190670901486 61 AMTR_s00029p00022290 Transcription factor SRM1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.5 0.8184723131750177 57 AMTR_s00065p00037640 evm_27.TU.AmTr_v1.0_scaffold00065.16 0.8160068404376295 60 AMTR_s00156p00078120 Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica RAD23D, evm_27.TU.AmTr_v1.0_scaffold00156.38 0.8145445224762715 90 AMTR_s00142p00049490 Nutrient uptake.phosphorus assimilation.phosphate signalling.PHR1 transcription factor evm_27.TU.AmTr_v1.0_scaffold00142.28 0.8140573527932111 63 AMTR_s00021p00196860 RNA biosynthesis.transcriptional activation.VOZ transcription factor ATVOZ1, VOZ1, evm_27.TU.AmTr_v1.0_scaffold00021.160 0.812608912290159 66 AMTR_s00068p00196240 ECT8, evm_27.TU.AmTr_v1.0_scaffold00068.160 0.8097834687391373 69 AMTR_s00006p00266790 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.UAfT nucleotide sugar transporter evm_27.TU.AmTr_v1.0_scaffold00006.292 0.8092912950823882 71 AMTR_s00175p00047170 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.chorismate synthase EMB1144, evm_27.TU.AmTr_v1.0_scaffold00175.20 0.8087920294316457 73 AMTR_s00035p00187610 Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00035.40 0.8081053673184482 74 AMTR_s00103p00067500 Multi-process regulation.circadian clock.TIC circadian clock regulator TIC, evm_27.TU.AmTr_v1.0_scaffold00103.34 0.8079639734595949 75 AMTR_s00059p00094000 DNA damage response.DNA repair mechanisms.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.ARP AP-endonuclease ARP, evm_27.TU.AmTr_v1.0_scaffold00059.68 0.807913500688313 76 AMTR_s00111p00096770 Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT-type) CAT9, evm_27.TU.AmTr_v1.0_scaffold00111.69 0.8076773299992436 77 AMTR_s00084p00172920 evm_27.TU.AmTr_v1.0_scaffold00084.45 0.807664458055845 78 AMTR_s00002p00243900 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor BLH7, evm_27.TU.AmTr_v1.0_scaffold00002.320 0.8073440309728799 79 AMTR_s00129p00081030 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-5 component PAE2, evm_27.TU.AmTr_v1.0_scaffold00129.58 0.8059621209300758 80 AMTR_s00036p00077430 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor AtIDD7, IDD7, evm_27.TU.AmTr_v1.0_scaffold00036.29 0.8058567460794236 81 AMTR_s00018p00211530 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component RPN10, MCB1, ATMCB1, MBP1, evm_27.TU.AmTr_v1.0_scaffold00018.131 0.8051246168729217 99 AMTR_s00071p00180880 MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.184 0.8048358050919874 84 AMTR_s00002p00262170 Protein degradation.peptide tagging.Homologous-to-Ubiquitin (HUB)-anchor addition.HUB ubiquitin-fold protein evm_27.TU.AmTr_v1.0_scaffold00002.458 0.8043833961226982 85 AMTR_s00038p00173360 RNA biosynthesis.transcriptional activation.CAMTA transcription factor CAMTA3, SR1, evm_27.TU.AmTr_v1.0_scaffold00038.113 0.8041286695651498 86 AMTR_s00057p00208300 evm_27.TU.AmTr_v1.0_scaffold00057.251 0.8031321903004874 87 AMTR_s00066p00073650 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCb-type E3 ligase ARI8, ATARI8, evm_27.TU.AmTr_v1.0_scaffold00066.52 0.8027335222873998 89 AMTR_s00059p00106830 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor IDD2, AtIDD2, evm_27.TU.AmTr_v1.0_scaffold00059.81 0.801571645910721 92 AMTR_s00058p00125550 evm_27.TU.AmTr_v1.0_scaffold00058.89 0.801105680924547 95