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  5. AMTR_s00106p00141160

AMTR_s00106p00141160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.113

Description : Protein degradation.peptidase families.metallopeptidase activities.Matrixin-type metalloprotease


Gene families : OG0002614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00141160
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT1G70170 MMP matrix metalloproteinase 0.04 OrthoFinder output from all 47 species
Ala_g32271 MMP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0187.g056745 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ehy_g30544 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01020151001 MMP Protein degradation.peptidase families.metallopeptidase... 0.06 OrthoFinder output from all 47 species
LOC_Os06g13180.1 MMP, LOC_Os06g13180 Matrixin-type metalloprotease 0.05 OrthoFinder output from all 47 species
MA_10426152g0010 No alias Matrixin-type metalloprotease 0.04 OrthoFinder output from all 47 species
Smo110370 No alias Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
Solyc04g005040.1.1 Solyc04g005040 Matrixin-type metalloprotease 0.05 OrthoFinder output from all 47 species
Solyc04g005050.1.1 Solyc04g005050 Matrixin-type metalloprotease 0.05 OrthoFinder output from all 47 species
Spa_g49383 MMP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Tin_g08223 MMP EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Zm00001e036059_P001 MMP, Zm00001e036059 Matrixin-type metalloprotease 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0031012 extracellular matrix IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002477 Peptidoglycan-bd-like 62 119
IPR001818 Pept_M10_metallopeptidase 150 312
No external refs found!