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  5. AMTR_s00103p00097030

AMTR_s00103p00097030 (SMT1, CPH,...)


Aliases : SMT1, CPH, evm_27.TU.AmTr_v1.0_scaffold00103.52

Description : Lipid metabolism.phytosterols.campesterol synthesis.sterol C-24 methyltransferase


Gene families : OG0000656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000656_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00097030
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G76090 SMT3 sterol methyltransferase 3 0.03 OrthoFinder output from all 47 species
Ala_g11961 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Als_g26801 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aop_g18802 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene26567.t1 SMT2, FRL1,... EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene47522.t1 SMT2, FRL1,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Azfi_s0173.g055793 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ceric.05G018800.1 SMT1, CPH,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dac_g25896 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dde_g08096 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ehy_g19532 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
GSVIVT01023969001 No alias Lipid metabolism.phytosterols.campesterol... 0.02 OrthoFinder output from all 47 species
LOC_Os03g04340.1 SMT2, FRL1,... sterol C-24 methyltransferase 0.03 OrthoFinder output from all 47 species
Lfl_g18002 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Lfl_g18515 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
MA_85485g0010 SMT2, FRL1, CVP1 24-methylenesterol C-methyltransferase 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g28998 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0114.g020901 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Solyc01g111830.3.1 SMT2, FRL1,... sterol C-24 methyltransferase 0.03 OrthoFinder output from all 47 species
Spa_g24171 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Zm00001e038942_P001 SMT2, FRL1,... sterol C-24 methyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006694 steroid biosynthetic process IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006189 'de novo' IMP biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0034023 5-(carboxyamino)imidazole ribonucleotide mutase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013216 Methyltransf_11 105 199
IPR013705 Sterol_MeTrfase_C 276 342
No external refs found!