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  5. Aev_g07325

Aev_g07325


Description : subunit alpha of coat protein complex & original description: none


Gene families : OG0001943 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001943_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g07325
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00220200 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
AT1G62020 No alias Coatomer, alpha subunit 0.04 OrthoFinder output from all 47 species
AT2G21390 No alias Coatomer, alpha subunit 0.05 OrthoFinder output from all 47 species
Ala_g08580 No alias subunit alpha of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
Ala_g18597 No alias subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Als_g16600 No alias subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0157.g053779 No alias subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.27G001800.1 Ceric.27G001800 subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.37G062500.1 Ceric.37G062500 subunit alpha of coat protein complex & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.152 No alias Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Cre13.g565850 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Dac_g09707 No alias subunit alpha of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Dcu_g07776 No alias subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Dcu_g12109 No alias subunit alpha of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01009813001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Gb_09624 No alias subunit alpha of coat protein complex 0.03 OrthoFinder output from all 47 species
Gb_15817 No alias subunit alpha of coat protein complex 0.02 OrthoFinder output from all 47 species
LOC_Os03g50340.1 LOC_Os03g50340 subunit alpha of coat protein complex 0.05 OrthoFinder output from all 47 species
LOC_Os09g04110.1 LOC_Os09g04110 subunit alpha of coat protein complex 0.04 OrthoFinder output from all 47 species
Len_g20642 No alias subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Lfl_g09317 No alias subunit alpha of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Mp3g00050.1 No alias subunit alpha of coat protein complex 0.04 OrthoFinder output from all 47 species
Nbi_g06320 No alias subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Smo77651 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Smo85610 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
Spa_g25852 No alias subunit alpha of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
Tin_g06133 No alias subunit alpha of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
Zm00001e005441_P001 Zm00001e005441 subunit alpha of coat protein complex 0.05 OrthoFinder output from all 47 species
Zm00001e012192_P001 Zm00001e012192 subunit alpha of coat protein complex 0.04 OrthoFinder output from all 47 species
Zm00001e016505_P002 Zm00001e016505 subunit alpha of coat protein complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0070939 Dsl1/NZR complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 241 276
IPR001680 WD40_repeat 126 163
IPR001680 WD40_repeat 45 79
IPR001680 WD40_repeat 198 231
IPR001680 WD40_repeat 84 121
IPR006692 Coatomer_WD-assoc_reg 340 769
IPR010714 Coatomer_asu_C 814 1215
No external refs found!