AMTR_s00089p00093330 (OVA5, ATKRS-2,...)

Aliases : OVA5, ATKRS-2, evm_27.TU.AmTr_v1.0_scaffold00089.48

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase

Gene families : OG0005865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005865_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00089p00093330
Cluster	HCCA: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
AT3G13490	OVA5, ATKRS-2	Lysyl-tRNA synthetase, class II	0.07	OrthoFinder output from all 47 species
Adi_g081278	OVA5, ATKRS-2	lysine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g21504	OVA5, ATKRS-2	lysine-tRNA ligase & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene15254.t1	OVA5, ATKRS-2,...	lysine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0008.g011549	OVA5, ATKRS-2	lysine-tRNA ligase & original description: CDS=158-1798	0.03	OrthoFinder output from all 47 species
Ceric.19G049100.1	OVA5, ATKRS-2,...	lysine-tRNA ligase & original description:...	0.07	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001164.2	OVA5, ATKRS-2	Lysine--tRNA ligase, chloroplastic/mitochondrial...	0.01	OrthoFinder output from all 47 species
Dac_g21585	OVA5, ATKRS-2	lysine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g11670	OVA5, ATKRS-2	lysine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01025473001	OVA5, ATKRS-2	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.09	OrthoFinder output from all 47 species
Gb_05325	OVA5, ATKRS-2	lysine-tRNA ligase	0.07	OrthoFinder output from all 47 species
LOC_Os02g41470.3	OVA5, ATKRS-2,...	lysine-tRNA ligase	0.06	OrthoFinder output from all 47 species
Len_g27813	OVA5, ATKRS-2	lysine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g18377	OVA5, ATKRS-2	lysine-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Mp7g09810.1	OVA5, ATKRS-2	lysine-tRNA ligase	0.07	OrthoFinder output from all 47 species
Msp_g11060	OVA5, ATKRS-2	lysine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g08031	OVA5, ATKRS-2	lysine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g15615	OVA5, ATKRS-2	lysine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g65469	OVA5, ATKRS-2	lysine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c19_5720V3.1	OVA5, ATKRS-2,...	Lysyl-tRNA synthetase, class II	0.01	OrthoFinder output from all 47 species
Smo79851	OVA5, ATKRS-2	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder output from all 47 species
Spa_g30430	OVA5, ATKRS-2	lysine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e006285_P003	OVA5, ATKRS-2,...	lysine-tRNA ligase	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003747	translation release factor activity	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0003856	3-dehydroquinate synthase activity	IEP	HCCA
MF	GO:0003993	acid phosphatase activity	IEP	HCCA
BP	GO:0006415	translational termination	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0008079	translation termination factor activity	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	HCCA
MF	GO:0016149	translation release factor activity, codon specific	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0022411	cellular component disassembly	IEP	HCCA
BP	GO:0032984	protein-containing complex disassembly	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0070403	NAD+ binding	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004364	Aa-tRNA-synt_II	211	573
IPR004365	NA-bd_OB_tRNA	115	192

External Links

No external refs found!

AMTR_s00089p00093330 (OVA5, ATKRS-2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation