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  5. AMTR_s00077p00119820

AMTR_s00077p00119820 (PGR5,...)


Aliases : PGR5, evm_27.TU.AmTr_v1.0_scaffold00077.111

Description : Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGR5-like component


Gene families : OG0006653 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00119820
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT2G05620 PGR5 proton gradient regulation 5 0.03 OrthoFinder output from all 47 species
Aev_g04516 PGR5 component *(PGR5) of cyclic electron flow PGR5-PGRL1... 0.04 OrthoFinder output from all 47 species
Als_g03348 PGR5 component *(PGR5) of cyclic electron flow PGR5-PGRL1... 0.03 OrthoFinder output from all 47 species
Aob_g02627 PGR5 component *(PGR5) of cyclic electron flow PGR5-PGRL1... 0.05 OrthoFinder output from all 47 species
Aop_g13123 PGR5 component *(PGR5) of cyclic electron flow PGR5-PGRL1... 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011356 PGR5 component *(PGR5) of cyclic electron flow PGR5-PGRL1... 0.04 OrthoFinder output from all 47 species
Azfi_s0308.g064025 PGR5 component *(PGR5) of cyclic electron flow PGR5-PGRL1... 0.05 OrthoFinder output from all 47 species
Ceric.31G070400.1 PGR5, Ceric.31G070400 component *(PGR5) of cyclic electron flow PGR5-PGRL1... 0.03 OrthoFinder output from all 47 species
Gb_25841 PGR5 component PGR5-like of cyclic electron flow PGR5/PGRL1 complex 0.04 OrthoFinder output from all 47 species
LOC_Os08g45190.1 PGR5, LOC_Os08g45190 component PGR5-like of cyclic electron flow PGR5/PGRL1 complex 0.05 OrthoFinder output from all 47 species
Pir_g14245 PGR5 component *(PGR5) of cyclic electron flow PGR5-PGRL1... 0.05 OrthoFinder output from all 47 species
Pnu_g11529 PGR5 component *(PGR5) of cyclic electron flow PGR5-PGRL1... 0.04 OrthoFinder output from all 47 species
Ppi_g00123 PGR5 component *(PGR5) of cyclic electron flow PGR5-PGRL1... 0.02 OrthoFinder output from all 47 species
Tin_g02395 PGR5 component *(PGR5) of cyclic electron flow PGR5-PGRL1... 0.04 OrthoFinder output from all 47 species
Zm00001e003846_P001 PGR5, Zm00001e003846 component PGR5-like of cyclic electron flow PGR5/PGRL1 complex 0.05 OrthoFinder output from all 47 species
Zm00001e022011_P001 PGR5, Zm00001e022011 component PGR5-like of cyclic electron flow PGR5/PGRL1 complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005231 excitatory extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0030288 outer membrane-bounded periplasmic space IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!