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Aliases : TLP18.3
Description : protein involved in PS-II assembly *(Psb32) & original description: none
Gene families : OG0007030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007030_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aev_g07030 | |
| Cluster | HCCA: Cluster_96 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00126870 | TLP18.3,... | Photosynthesis.photophosphorylation.photosystem... | 0.11 | OrthoFinder output from all 47 species | |
| AT1G54780 | TLP18.3 | thylakoid lumen 18.3 kDa protein | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g001945 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ala_g01414 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g32115 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g07689 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g08442 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033664 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g08697 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.05G027600.1 | TLP18.3, Ceric.05G027600 | protein involved in PS-II assembly *(Psb32) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Cre03.g182150 | TLP18.3 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g09996 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g00821 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g47338 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g06594 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01000004001 | TLP18.3 | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g33280.1 | TLP18.3, LOC_Os05g33280 | Psb32 protein involved in PS-II assembly | 0.09 | OrthoFinder output from all 47 species | |
| Len_g16675 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.12 | OrthoFinder output from all 47 species | |
| Lfl_g03752 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.07 | OrthoFinder output from all 47 species | |
| MA_10433010g0010 | TLP18.3 | Psb32 protein involved in PS-II assembly | 0.06 | OrthoFinder output from all 47 species | |
| Mp8g16080.1 | TLP18.3 | Psb32 protein involved in PS-II assembly | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g03092 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Nbi_g17006 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g00411 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Pnu_g12645 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Pp3c11_19220V3.1 | TLP18.3, Pp3c11_19220 | thylakoid lumen 18.3 kDa protein | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g17567 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007460 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g08275 | No alias | protein involved in PS-II assembly *(Psb32) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo127459 | TLP18.3 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g098640.3.1 | TLP18.3, Solyc01g098640 | Psb32 protein involved in PS-II assembly | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g05586 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g05587 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Tin_g07118 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e026820_P001 | TLP18.3, Zm00001e026820 | Psb32 protein involved in PS-II assembly | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006541 | glutamine metabolic process | IEP | HCCA |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016211 | ammonia ligase activity | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007621 | TPM_dom | 119 | 243 |
| No external refs found! |