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  5. AMTR_s00070p00103330

AMTR_s00070p00103330 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00070.51

No description available


Gene families : OG0001680 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00070p00103330

Target Alias Description ECC score Gene Family Method Actions
Aob_g15859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G002200.1 Ceric.05G002200 not classified & original description: pacid=50578529... 0.04 OrthoFinder output from all 47 species
Ceric.21G071000.1 Ceric.21G071000 not classified & original description: pacid=50604391... 0.02 OrthoFinder output from all 47 species
Ehy_g21780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g65330.1 LOC_Os01g65330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g50220.1 LOC_Os06g50220 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_209702g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g44876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0186.g025065 No alias not classified & original description: CDS=638-2614 0.03 OrthoFinder output from all 47 species
Sam_g26068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g065460.2.1 Solyc06g065460 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e014795_P002 Zm00001e014795 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019113_P001 Zm00001e019113 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e027001_P003 Zm00001e027001 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e040894_P001 Zm00001e040894 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004107 chorismate synthase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007700 DUF668 377 462
IPR021864 DUF3475 157 213
No external refs found!