1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00066p00134410

AMTR_s00066p00134410 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.129

Description : FRIGIDA-like protein 3 OS=Arabidopsis thaliana


Gene families : OG0000898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00134410
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT5G48385 No alias FRIGIDA-like protein 0.03 OrthoFinder output from all 47 species
Adi_g014978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g020466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088251 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g112383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g32898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15209 FRL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09930 FRL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000171001 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01001527001 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_32064 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_40916 No alias FRIGIDA-like protein 4a OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g40270.1 LOC_Os07g40270 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g16486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430352g0010 No alias FRIGIDA-like protein 4b OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g01067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g00670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g24038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24376 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo34543 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Zm00001e010685_P001 Zm00001e010685 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR012474 Frigida 154 450
No external refs found!