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  5. AMTR_s00061p00202270

AMTR_s00061p00202270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.246

Description : Protein modification.phosphorylation.atypical kinase families.ABC1 kinase


Gene families : OG0001876 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001876_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00202270

Target Alias Description ECC score Gene Family Method Actions
Adi_g020572 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03362 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21843 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08252 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36411 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000798 No alias ABC1 atypical protein kinase & original description: CDS=26-1147 0.04 OrthoFinder output from all 47 species
Tin_g06079 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004147 ABC1_dom 256 379
No external refs found!