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  5. AMTR_s00061p00131740

AMTR_s00061p00131740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.109

No description available


Gene families : OG0000227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00131740
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT2G17880 No alias Chaperone DnaJ-domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G13310 No alias Chaperone DnaJ-domain superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g00783 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13865 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g21455 J20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g00695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07977 TPR16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61816.t1 Aspi01Gene61816 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61820.t1 Aspi01Gene61820 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0024.g020416 No alias not classified & original description: CDS=52-738 0.02 OrthoFinder output from all 47 species
Azfi_s0076.g037845 No alias not classified & original description: CDS=1-747 0.03 OrthoFinder output from all 47 species
Azfi_s0365.g066960 No alias not classified & original description: CDS=1-849 0.02 OrthoFinder output from all 47 species
Ceric.08G060000.1 ERDJ3B,... not classified & original description: pacid=50638460... 0.03 OrthoFinder output from all 47 species
Cre07.g346600 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g20831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02611 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04446 J20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_02868 No alias Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_04899 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_04901 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_09159 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_09162 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_09163 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_15815 No alias Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_36084 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g38368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21497 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10085613g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_281725g0010 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Nbi_g33740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08236 ATDJC39, ARL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g081530.1.1 Solyc04g081530 Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Zm00001e001518_P001 J2, ATJ2, Zm00001e001518 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e024686_P001 Zm00001e024686 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025612_P001 J20, Zm00001e025612 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 80 140
No external refs found!