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  5. AMTR_s00055p00205140

AMTR_s00055p00205140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00055.143

No description available


Gene families : OG0002636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00205140
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00098090 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aev_g34222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51004.t1 Aspi01Gene51004 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g06981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_12961 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g13190.1 LOC_Os06g13190 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g38855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_44391g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g05112 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g080600.1.1 Solyc02g080600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g113810.1.1 Solyc03g113810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g006390.1.1 Solyc05g006390 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e015779_P001 Zm00001e015779 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e036058_P001 Zm00001e036058 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!