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  5. AMTR_s00049p00169350

AMTR_s00049p00169350 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.158

Description : Protein STICHEL-like 2 OS=Arabidopsis thaliana


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00169350

Target Alias Description ECC score Gene Family Method Actions
Als_g21375 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51975 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08476 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29780 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G062000.1 STI, Ceric.32G062000 not classified & original description: pacid=50597745... 0.03 OrthoFinder output from all 47 species
Dac_g10712 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12024 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02399 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12787 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29947 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021264001 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g20046 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12306 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32095 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43940 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17381 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!