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  5. AMTR_s00047p00097450

AMTR_s00047p00097450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00047.41

Description : Phytohormones.signalling peptides.NCRP (non-cysteine-rich-peptide) category.TDL family.TDL precursor polypeptide


Gene families : OG0001671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00047p00097450
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene00102.t1 Aspi01Gene00102 TDL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23386.t1 TPD1, Aspi01Gene23386 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025267 No alias TDL precursor polypeptide & original description: CDS=400-1203 0.04 OrthoFinder output from all 47 species
Azfi_s2321.g110584 TPD1 TDL precursor polypeptide & original description: CDS=796-1494 0.03 OrthoFinder output from all 47 species
Ceric.01G003500.1 Ceric.01G003500 TDL precursor polypeptide & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.05G007900.1 Ceric.05G007900 TDL precursor polypeptide & original description:... 0.04 OrthoFinder output from all 47 species
MA_16430g0010 TPD1 TDL precursor polypeptide 0.03 OrthoFinder output from all 47 species
Nbi_g08824 No alias TDL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c21_2250V3.1 Pp3c21_2250 No annotation 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002275 No alias TDL precursor polypeptide & original description: CDS=1-468 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010785 No alias TDL precursor polypeptide & original description: CDS=1-636 0.03 OrthoFinder output from all 47 species
Sam_g39041 No alias TDL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g25950 No alias TDL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004832_P001 Zm00001e004832 TDL precursor polypeptide 0.03 OrthoFinder output from all 47 species
Zm00001e012832_P001 Zm00001e012832 TDL precursor polypeptide 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!