AMTR_s00045p00165950 (MEE24, AtWRKY35,...)

Aliases : MEE24, AtWRKY35, WRKY35, evm_27.TU.AmTr_v1.0_scaffold00045.191

Description : RNA biosynthesis.transcriptional activation.WRKY transcription factor

Gene families : OG0000132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00045p00165950

Target	Alias	Description	ECC score	Gene Family Method
AT1G29280	ATWRKY65, WRKY65	WRKY DNA-binding protein 65	0.04	OrthoFinder output from all 47 species
AT2G23320	WRKY15	WRKY DNA-binding protein 15	0.02	OrthoFinder output from all 47 species
AT3G04670	WRKY39, ATWRKY39	WRKY DNA-binding protein 39	0.03	OrthoFinder output from all 47 species
AT3G58710	ATWRKY69, WRKY69	WRKY DNA-binding protein 69	0.03	OrthoFinder output from all 47 species
AT4G23550	ATWRKY29, WRKY29	WRKY family transcription factor	0.03	OrthoFinder output from all 47 species
AT4G31550	ATWRKY11, WRKY11	WRKY DNA-binding protein 11	0.04	OrthoFinder output from all 47 species
Adi_g056223	WRKY21	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g056224	ATWRKY11, WRKY11	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g098361	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g105610	ATWRKY7, WRKY7	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g04714	WRKY21	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g05212	ATWRKY11, WRKY11	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g12302	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g32578	ATWRKY11, WRKY11	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g42336	WRKY21	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g51894	WRKY17, ATWRKY17	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g59086	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g59149	WRKY74, ATWRKY74	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g01312	WRKY21	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g08916	WRKY17, ATWRKY17	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g09866	ATWRKY65, WRKY65	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene16598.t1	WRKY39,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g32681	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.03G091400.1	ATWRKY11,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.04G083300.1	WRKY74,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.07G043400.1	ATWRKY11,...	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.33G025500.1	WRKY17,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g08172	ATWRKY65, WRKY65	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g16648	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g01119	ATWRKY11, WRKY11	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g05957	ATWRKY11, WRKY11	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07852	WRKY21	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01001286001	WRKY39, ATWRKY39	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01021252001	ATWRKY65, WRKY65	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01022067001	ATWRKY7, WRKY7	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
LOC_Os01g54600.1	ATWRKY69,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os02g16540.1	ATWRKY27,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os03g53050.1	WRKY39,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os04g21950.1	ATWRKY11,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os04g51560.1	ATWRKY11,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Len_g43656	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g21275	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_109104g0010	MEE24, AtWRKY35, WRKY35	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_11492g0010	WRKY21	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_124797g0010	ATWRKY65, WRKY65	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Msp_g10597	WRKY21	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g12954	WRKY21	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g02919	WRKY17, ATWRKY17	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g15649	ATWRKY7, WRKY7	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g27101	WRKY22, AtWRKY22	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g10425	WRKY14, AR411, ATWRKY14	WRKY-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Pnu_g12085	WRKY14, AR411, ATWRKY14	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g20362	WRKY14, AR411, ATWRKY14	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g29695	WRKY21	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g49007	WRKY39, ATWRKY39	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g11208	WRKY21	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g12364	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e014530_P002	Zm00001e014530	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e023305_P002	WRKY14, AR411,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e025758_P001	WRKY22,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e026629_P001	MEE24, AtWRKY35,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	121	179

External Links

No external refs found!

AMTR_s00045p00165950 (MEE24, AtWRKY35,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation