AMTR_s00045p00073480 (SAM2, MAT2, AtSAM2,...)

Aliases : SAM2, MAT2, AtSAM2, SAM-2, evm_27.TU.AmTr_v1.0_scaffold00045.62

Description : Coenzyme metabolism.S-adenosyl methionine (SAM) cycle.S-adenosyl methionine synthetase

Gene families : OG0000645 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000645_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00045p00073480

Target	Alias	Description	ECC score	Gene Family Method
AT1G02500	MAT1, AtSAM1, SAM1, SAM-1	S-adenosylmethionine synthetase 1	0.04	OrthoFinder output from all 47 species
AT2G36880	MAT3	methionine adenosyltransferase 3	0.04	OrthoFinder output from all 47 species
AT4G01850	SAM2, MAT2, AtSAM2, SAM-2	S-adenosylmethionine synthetase 2	0.05	OrthoFinder output from all 47 species
Ala_g10857	SAMS3, MTO3, MAT4	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Ala_g33139	SAM2, MAT2, AtSAM2, SAM-2	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Aop_g68673	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Azfi_s0232.g059327	SAMS3, MTO3, MAT4	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Cba_g13258	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Dac_g04209	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Dcu_g08107	SAMS3, MTO3, MAT4	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Dcu_g27683	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Dde_g24197	SAM2, MAT2, AtSAM2, SAM-2	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Ehy_g04512	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
GSVIVT01033651001	MAT3	Coenzyme metabolism.S-adenosyl methionine (SAM)...	0.03	OrthoFinder output from all 47 species
Gb_21840	SAMS3, MTO3, MAT4	S-adenosyl methionine synthetase	0.03	OrthoFinder output from all 47 species
Gb_29410	SAMS3, MTO3, MAT4	S-adenosyl methionine synthetase	0.03	OrthoFinder output from all 47 species
Gb_29411	SAMS3, MTO3, MAT4	S-adenosyl methionine synthetase	0.03	OrthoFinder output from all 47 species
LOC_Os05g04510.1	MAT1, AtSAM1,...	S-adenosyl methionine synthetase	0.03	OrthoFinder output from all 47 species
Len_g14427	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Lfl_g02008	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Lfl_g34452	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
MA_10435775g0010	SAMS3, MTO3, MAT4	S-adenosyl methionine synthetase	0.05	OrthoFinder output from all 47 species
MA_197296g0010	SAMS3, MTO3, MAT4	S-adenosyl methionine synthetase	0.05	OrthoFinder output from all 47 species
Msp_g10534	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Nbi_g03548	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Ppi_g07426	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000669	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Sam_g06832	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Sam_g07523	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Solyc10g083970.1.1	MAT3, Solyc10g083970	S-adenosyl methionine synthetase	0.03	OrthoFinder output from all 47 species
Spa_g14825	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Spa_g14826	SAM2, MAT2, AtSAM2, SAM-2	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Spa_g24994	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Zm00001e040353_P003	SAM2, MAT2,...	S-adenosyl methionine synthetase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004478	methionine adenosyltransferase activity	IEA	Interproscan
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEA	Interproscan
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0046500	S-adenosylmethionine metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	HCCA
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006541	glutamine metabolic process	IEP	HCCA
BP	GO:0006542	glutamine biosynthetic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016211	ammonia ligase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016841	ammonia-lyase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0050662	obsolete coenzyme binding	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022629	S-AdoMet_synt_central	116	238
IPR022628	S-AdoMet_synt_N	3	101
IPR022630	S-AdoMet_synt_C	240	381

External Links

No external refs found!

AMTR_s00045p00073480 (SAM2, MAT2, AtSAM2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation