1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00039p00096400

AMTR_s00039p00096400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.54

Description : Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.7-hydroxymethyl chlorophyll(ide) a reductase


Gene families : OG0007059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007059_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00096400

Target Alias Description ECC score Gene Family Method Actions
Adi_g013357 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.09 OrthoFinder output from all 47 species
Aop_g07470 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene40850.t1 Aspi01Gene40850 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene40852.t1 Aspi01Gene40852 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0430.g069316 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.05 OrthoFinder output from all 47 species
Cba_g18798 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.04 OrthoFinder output from all 47 species
Ceric.08G074700.1 Ceric.08G074700 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.08 OrthoFinder output from all 47 species
Cre11.g468700 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 OrthoFinder output from all 47 species
Dac_g13806 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.04 OrthoFinder output from all 47 species
Dcu_g18978 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.02 OrthoFinder output from all 47 species
Dde_g11978 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01028992001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.08 OrthoFinder output from all 47 species
Gb_34355 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.03 OrthoFinder output from all 47 species
LOC_Os04g25400.2 LOC_Os04g25400 7-hydroxymethyl chlorophyll(ide) a reductase 0.03 OrthoFinder output from all 47 species
Len_g16388 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.03 OrthoFinder output from all 47 species
Lfl_g06991 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.05 OrthoFinder output from all 47 species
MA_6348739g0010 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.04 OrthoFinder output from all 47 species
MA_9928769g0020 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.04 OrthoFinder output from all 47 species
Mp7g02790.1 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.04 OrthoFinder output from all 47 species
Msp_g27369 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.02 OrthoFinder output from all 47 species
Nbi_g13256 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.02 OrthoFinder output from all 47 species
Pir_g05993 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.04 OrthoFinder output from all 47 species
Ppi_g01348 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015444 No alias component *(SAM/Tob55) of outer mitochondrion membrane... 0.02 OrthoFinder output from all 47 species
Sam_g17635 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.03 OrthoFinder output from all 47 species
Solyc09g091100.4.1 Solyc09g091100 7-hydroxymethyl chlorophyll(ide) a reductase 0.05 OrthoFinder output from all 47 species
Tin_g02659 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016149 translation release factor activity, codon specific IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007525 FrhB_FdhB_C 195 354
IPR007516 Co_F420_Hydgase/DH_bsu_N 112 188
No external refs found!