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  5. AMTR_s00029p00164810

AMTR_s00029p00164810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.213

No description available


Gene families : OG0004528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00164810

Target Alias Description ECC score Gene Family Method Actions
Aop_g04233 No alias component *(CTNNBL1) of MAC spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Ceric.37G056700.1 Ceric.37G056700 component *(CTNNBL1) of MAC spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000203.14 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre02.g093300 No alias No description available 0.01 OrthoFinder output from all 47 species
Len_g16251 No alias component *(CTNNBL1) of MAC spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Mp8g14140.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0004174 electron-transferring-flavoprotein dehydrogenase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004826 phenylalanine-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016649 oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR013180 CTNNBL1_N 28 130
No external refs found!