Aliases : evm_27.TU.AmTr_v1.0_scaffold00028.124
Description : DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana
Gene families : OG0000629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000629_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00025p00230510 | evm_27.TU.AmTr_v1... | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
AT1G58060 | No alias | RNA helicase family protein | 0.04 | OrthoFinder output from all 47 species | |
AT2G01130 | No alias | DEA(D/H)-box RNA helicase family protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G04895 | No alias | DEA(D/H)-box RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g021909 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g057149 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g105502 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g01587 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g21216 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g04475 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g14017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0449.g070725 | No alias | not classified & original description: CDS=208-3285 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g14820 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g21782 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.06G015600.1 | Ceric.06G015600 | not classified & original description: pacid=50620151... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.20G077000.1 | Ceric.20G077000 | not classified & original description: pacid=50565979... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.23G070100.1 | Ceric.23G070100 | not classified & original description: pacid=50609964... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021094.26 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cre03.g171650 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g16672 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g02884.1 | LOC_Os01g02884 | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g53760.1 | LOC_Os03g53760 | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g35260.1 | LOC_Os04g35260 | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g33275.1 | LOC_Os10g33275 | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Len_g47532 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g02413 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_10429367g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
MA_10432908g0020 | No alias | DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... | 0.01 | OrthoFinder output from all 47 species | |
MA_10437209g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
MA_22839g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... | 0.04 | OrthoFinder output from all 47 species | |
MA_97917g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g10298 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g43492 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g06502 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g09359 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g14536 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g15305 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g08954 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g14582 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g08111 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g26916 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g02164 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e004608_P001 | Zm00001e004608 | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0004386 | helicase activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003913 | DNA photolyase activity | IEP | HCCA |
MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
BP | GO:0006664 | glycolipid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
MF | GO:0008915 | lipid-A-disaccharide synthase activity | IEP | HCCA |
BP | GO:0009245 | lipid A biosynthetic process | IEP | HCCA |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
CC | GO:0032040 | small-subunit processome | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046493 | lipid A metabolic process | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | HCCA |
BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1903509 | liposaccharide metabolic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |