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  5. AMTR_s00017p00128950

AMTR_s00017p00128950 (ATCPK4, CPK4,...)


Aliases : ATCPK4, CPK4, evm_27.TU.AmTr_v1.0_scaffold00017.52

Description : Protein modification.phosphorylation.CAMK kinase superfamily.CDPK kinase


Gene families : OG0000042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00017p00128950
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Als_g39172 CPK5, ATCPK5 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Cre03.g144484 ATCPK12, CDPK9,... Calcium-dependent protein kinase 12 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_38618 CPK8, CDPK19 protein kinase (CDPK). nitrate response regulator kinase... 0.02 OrthoFinder output from all 47 species
LOC_Os05g50810.1 CPK3, CDPK6,... protein kinase (CDPK) 0.02 OrthoFinder output from all 47 species
Len_g46305 CPK17 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Nbi_g04309 CPK13 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ppi_g28687 ATCPK12, CDPK9,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Spa_g07987 CPK17 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e020430_P001 CPK3, CDPK6,... protein kinase (CDPK) 0.01 OrthoFinder output from all 47 species
Zm00001e034409_P002 PEPKR2, Zm00001e034409 protein kinase (PEPRK) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 28 284
IPR011992 EF-hand-dom_pair 404 462
IPR011992 EF-hand-dom_pair 332 391
No external refs found!